Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYEGPKTKFHALMQEQIHNEFTAAQQYVAIAVYFDS--EDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRN-----QFDRPREALALALDQERTVTDQVGRLTAVARDEGDFLGEQFMQ-WFLQEQIEEVALMATLVRVADRAGA--NLFELENFVAREVDVAPAASGAPHAAGGRL
3A68 Chain:A ((37-207))
--ARQKYVDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVETEYLGEQVEAIKRISEYVAQLRRVGKGHGVWHFDQMLLHE------------------
General information:
TITO was launched using:
RESULT:
Template:
3A68.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47097 for 1225 contacts (-38.4/contact) +
2D Compatibility (PS) -18141 + (NN) -15330 + (LL) 928
1D Compatibility (HY) -6800 + (ID) 2050
Total energy: -88490.0 ( -72.24 by residue)
QMean score : 0.514
(partial model without unconserved sides chains):
PDB file :
Tito_3A68.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3A68-query.scw
PDB file :
Tito_Scwrl_3A68.pdb
: