Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTDSEKSATIKVTDASFATDVLSSNKPVLVDFWATWCGPCKMVAPVLEEIATERATDLTVAKLDVDTNPETARNFQVVSIPTLILFKDGQPVKRIVGAKGKAALLRELSDVVPNLN
2H6Y Chain:A ((5-104))
---------IHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADDYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQ-LKEFLD------
General information:
TITO was launched using:
RESULT:
Template:
2H6Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58843 for 727 contacts (-80.9/contact) +
2D Compatibility (PS) -10814 + (NN) -3885 + (LL) 928
1D Compatibility (HY) -11600 + (ID) 2700
Total energy: -86914.0 ( -119.55 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_2H6Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2H6Y-query.scw
PDB file :
Tito_Scwrl_2H6Y.pdb
: