Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNMPSILSLAVAGLLVAPVHAATAPSEPFQPPAESSLPDNAFGEMVRQGQALFVETRKNAPHLVGNQLNCVNCHLDQGRRANSAPQWAAYPVYPAFRAKNNKVNTFAERLQGCFQFSMNGKVPAADSPEIKALTVYAYWLASQAPTGVSLPGRGYPDVAPPEGGYSIERGAKVYAAQCAICHGADGQGQMALGQTVFPPLWGAQSF--------NWGAGMHRINTAASFIKYNMPLGKPGTLSDRDAWDVAAFMNSHERPQDPRLVDGSVEKTRQKFHANDGVNLYGQKVNGVLLGQGI------------------------------------------ |
| 2XTS Chain:B ((2-204)) | ---------------------------------------------------------------------------------------------------------------------KLGLGREALPEEISAWDTA-----------VLPDGQGLR-----PGSGDVATGDALFADNCASCHGDFAEGL-----DSWPVLAGGDGSLTDPRPVKTIGSYWPYLSTVYDYVHRSMPFGSAQTLSVDDTYAITAFLLYSNGLVEDDFVLTHENFTQVVLPNAEGFYPDDRDQTEYPLFSKEPCMTDCAVGVEITKRAVDLNVTPEDPDGRPAGSMPDLGAAAA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2XTS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22768 for 1082 contacts (-21.0/contact) +
2D Compatibility (PS) -16038 + (NN) -9076 + (LL) 8180
1D Compatibility (HY) -4800 + (ID) 1750
Total energy: -46252.0 ( -42.75 by residue)
QMean score : 0.337
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