Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNTVKTVRELRAAVARA-RSEGKRIGFVPTMGNLHAGHAALVKKAGE-RADFVVVSIFVNPLQFGPSEDLDTYPRTLAADQERLLEAGCHLLFTPTVEEMYPDGMDGQTRIHVPGVSEGLCGASRPGHFEGVATVVSKLLNMVQPDLALFGEKDFQQLAVIRKLVRDLNLPVQIFGEPTVRAADGLALSSRNGYLDEQQRAAAPAIYRTLRQLGERIRAGAEDFPALLADARQALEQAGLRPDYLEIREPISLRPGVPGDRQLVILAAAYLGSTRLIDNLSVHLD |
3COY Chain:B ((22-288)) | -----------ADVSRALRLTGRRVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQ--------AYPRTPDDDLAQLRAEGVEIAFTPTTAAMYPDGL--RTTVQPGPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAAVALSAALTAAAHAATAGAQAALDAARAVLDA--APGVAVDYLELRD-IGLGP-MPLNGSGRLLVAARLGTTRLLDNIAIEI- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3COY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -167509 for 2075 contacts (-80.7/contact) +
2D Compatibility (PS) -28806 + (NN) -17234 + (LL) 724
1D Compatibility (HY) -21600 + (ID) 6400
Total energy: -240825.0 ( -116.06 by residue)
QMean score : 0.550
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