Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MIYTVTLNPSIDFIVRLDTLLLGSVNRMTSDDKYVGGKGINVSRILKRLKIDNTATGFIGGFTGHFVEDGLVSEGIKTDFVSVNEDTRINVKVKAKIETEINGGGPRITNEQLHRLEKLL---SRLTPEDTVVFAGSAPASLGNKVYNTLIPIAKKTGAEVVCDFEGQTLLDALAY-QPLLVKPNNHELADIFGVELEGLPDIEKYAHKILDKGAKNVIVSMAGDGALLVTPEASYFAKPIKGEVKNSVGAGDSMVAGFTGEFVKSKNPVEALKWGVACGTATTFSDDLATAEFIQDIYNKVEVEKL |
2JG5 Chain:A ((1-303)) | MIYTVTFNPSIDYVIFTNDFKIDGLNRATATYKFAGGKGINVSRVLKTLDVESTALGFAGGFPGKFIIDTLNNSAIQSNFIEVDEDTRINVKLKTGQETEINAPGPHITSTQFEQLLQQIKNTTS---EDIVIVAGSVPSSIPSDAYAQIAQITAQTGAKLVVDAEKELAESVL-PYHPLFIKPNKDELEVMFNTTVNSDADVIKYGRLLVDKGAQSVIVSLGGDGAIYIDKEISIKAVNPQGKVVNTVGSGDSTVAGMVAGIASGLSIEKAFQQAVACGTATAFDEDLATRDAIEKIKSQVTISVL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JG5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174277 for 2668 contacts (-65.3/contact) +
2D Compatibility (PS) -31293 + (NN) -2835 + (LL) 232
1D Compatibility (HY) -22800 + (ID) 6600
Total energy: -237573.0 ( -89.05 by residue)
QMean score : 0.490
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