Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKQDYISYIRSKVGHETIFLTYSGGILTDGKGRVLLQLRAD--KNSWGIIGGCMELGESSVDTLKREFFEETGLRVEPIRLLNVYTNFQDSYPNGDKAQTVGFIYEVSCPKPVNIEGFHNEETLQLDYFSKEDVKNITIVN--EQHQLILDEYFSQTFQMGR
1VK6 Chain:A ((137-266))----------------PQIAPCIIVAIRR-DDSILLAQHTRHRNGVHTVLAGFVEVGETLEQAVAREVMEESGIKVKNLRYVTSQPWP--------FPQSLMTAFMAEYDSG-DIVI-DPKELLEANWYRYDDLPL--LPPPGTVARRLIEDTVAMCRAEY-


General information:
TITO was launched using:
RESULT:

Template: 1VK6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -47860 for 921 contacts (-52.0/contact) +
2D Compatibility (PS) -13722 + (NN) -6718 + (LL) 1440
1D Compatibility (HY) -5600 + (ID) 900
Total energy: -73360.0 ( -79.65 by residue)
QMean score : 0.523

(partial model without unconserved sides chains):
PDB file : Tito_1VK6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VK6-query.scw
PDB file : Tito_Scwrl_1VK6.pdb: