Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEELFCIGCGARIQTENKDAAGYTPRAALEKGLETGELYCQRCFRLRHYNEITDVHITDDEFLKLLHEVGDSDALVVNVIDIFDFNGSIIPGLSRFVAGNDVLLVGNKKDILPKSVKDGKVTQWLTERAHEEGLRPVDVILTSAQNHHAIKDLIDTIEKYRHGRDVYVVGVTNVGKSTLINAIIREITGSRDVITTSRFPGTTLD---------------------------------------------------------KIEIPL---DDGSYIFDTPGIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQTLFLAGLARFDF-ISGQKQGFTAYFDNNLNLHRTKLVGADEFYTKHVGKLLTPPTGKEVSDFPKLVRHEFTIKNKMDIVYSGLGWIRVKSEAENPVVVAAWAPEGVAVVLRKALI |
| 2J69 Chain:A ((68-244)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------GVFRLLVLGDMKRGKSTFLNALIGEN-----LLPSDVNPCTAVLTVLRYGPEKKVTIHFNDGKSPQQLDFQNFKYKYTIDPAEAKKLEQEKKQAFPDVDYAVVEYPLTLLQKGIEIVDSPGLNDTEARN-ELS---LGYV---NNCHAILFVMRASQPCTLGERRYLENYIKG-RGLTVFFLVNAWDQVRESLIDPDDVEELQASENRLRQVFNANLAEYCTVEGQNIYDERVFELSSIQALRRRLKNPQADLDGTGFPKFMDSLNTFLTRE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2J69.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30181 for 779 contacts (-38.7/contact) +
2D Compatibility (PS) -12024 + (NN) 1096 + (LL) 10916
1D Compatibility (HY) -7200 + (ID) 1500
Total energy: -38893.0 ( -49.93 by residue)
QMean score : 0.346
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