Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSLNGKTMFISGASRGIGLAIAKRAARDGANIALIAKTAEPHPKLPGTVFTAAKELEEAGGQALPIVGDIRDPDAVASAVATTVEQFGGIDICVNNASAINLGSITEVPMKRFDLMNGIQVRGTYAVSQACIPHMKGRENPHILTLSPPI-LLEKKWLRPTAYMMAKYGMTLCALGIAEEMRADGIASNTLWPRTMVATAAVQNLLGG------DEAMARSRKPEVYADAAYVIVNKPATEYTGKTLLCEDVLVESGVTDLSVYDCVPGATLGVDLWVEDANPPGYLPA |
4NI5 Chain:A ((10-249)) | -RFKDKVVIVTGGASGIGEATARAFIREGAKVVIADFSD-----------------------ALFIKTDVADTRAVQALIARTVENYGRLDIMFANAGIAADAPIDELDEAAWQKTIDINLTGVYLCDKYAIDQMRSQGGGVIVNCGSIHSHVGKS--GVTAYAAAKGGVKLLTQTLAIDYGPQNIRVNAVCPGYIDT------PDDKKQALVALHPMGRLGRAEEVANAVLFLASDEASFVNGASLLVDG-------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4NI5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147469 for 1819 contacts (-81.1/contact) +
2D Compatibility (PS) -22154 + (NN) -327 + (LL) 3772
1D Compatibility (HY) -11600 + (ID) 2750
Total energy: -180528.0 ( -99.25 by residue)
QMean score : 0.522
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