Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALKSLVVLPLLVLVLLLVRVQPSLGKESAAAKFERQHMDSGNSPSSSSNYCNLMMCCRKMTQGKCKPVNTFVHESLADVKAVCSQKKVTCKNGQTNCYQSKSTMRITDCRETGSSKYPNCAYKTTQVEKHIIVACGGKPSVPVHFDASV
3EV4 Chain:A ((1-124))
--------------------------KETAAAKFERQHMDSST----SSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV
General information:
TITO was launched using:
RESULT:
Template:
3EV4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44622 for 859 contacts (-51.9/contact) +
2D Compatibility (PS) -13419 + (NN) -9922 + (LL) 2816
1D Compatibility (HY) -11600 + (ID) 4950
Total energy: -81697.0 ( -95.11 by residue)
QMean score : 0.405
(partial model without unconserved sides chains):
PDB file :
Tito_3EV4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3EV4-query.scw
PDB file :
Tito_Scwrl_3EV4.pdb
: