Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVRPLNCIVAVSQNMGIGKNGDLPWPPLRNEFQYFQRMTTVS------SVEGKQNLVIMGRKTWFSIPEKNRPLKDRINIVLSRELKE----------------PPKGAHFLAKSLDDALELIEDPELTNKVDVVWIVGGSSVYKEAMNKPGH---VRLFVTRIM-QEFESDAFFPEIDFE-------KYKLLPEYPGVPLDVQE--EKGIKYKFEVYEKNN |
| 3RG9 Chain:A ((26-240)) | -LRPFSVVVASDEKGGIGDGGTIPWE-IPEDMQYFRRVTTNLRGKNVKPSPSKRNAVVMGRKTWDSLPPKFRPLSNRLNVVLSRSATKEQLLAGIPDPIKRAEAANDVV-AVNGGLEDALRMLVSKEHTSSIETVFCIGGGTIYKQALCAPCVNVLQAIHRTVVRPASNSCSVFFDIPAAGTKTPEGLELVRES----ITDERVSTGAGGKKYQFEKLVPRN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RG9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -93207 for 1357 contacts (-68.7/contact) +
2D Compatibility (PS) -19531 + (NN) -6201 + (LL) -4
1D Compatibility (HY) -8800 + (ID) 2950
Total energy: -130693.0 ( -96.31 by residue)
QMean score : 0.555
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