Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFVLGKQEVIRGWEEGVAQMSVGQRAKLTISPDYAYGATGHPGIIPPNATLIFDVELLKLE
3UF8 Chain:A ((105-209))
-GLKYEDLTEGSGAE-ARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAAGVIPPNATLVFEVELLDV-
General information:
TITO was launched using:
RESULT:
Template:
3UF8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48133 for 788 contacts (-61.1/contact) +
2D Compatibility (PS) -11353 + (NN) -3478 + (LL) 444
1D Compatibility (HY) -12400 + (ID) 3000
Total energy: -77920.0 ( -98.88 by residue)
QMean score : 0.714
(partial model without unconserved sides chains):
PDB file :
Tito_3UF8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UF8-query.scw
PDB file :
Tito_Scwrl_3UF8.pdb
: