Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDAVSSDRNFPNSTNLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTHSLEECLVRTT
3HL5 Chain:A ((3-95))
--------------HMLPRNPSMADYEARIFTFGTWIYSVNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLEQKGQEYINNIHLTH----------
General information:
TITO was launched using:
RESULT:
Template:
3HL5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25765 for 669 contacts (-38.5/contact) +
2D Compatibility (PS) -10185 + (NN) -6438 + (LL) 1196
1D Compatibility (HY) -12400 + (ID) 4550
Total energy: -58142.0 ( -86.91 by residue)
QMean score : 0.447
(partial model without unconserved sides chains):
PDB file :
Tito_3HL5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3HL5-query.scw
PDB file :
Tito_Scwrl_3HL5.pdb
: