Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MERPQPDSMPQDLSEALKEATKEVHTQAENAEFMRNFQKGQVTRDGFKLVMASLYHIYVALEEEIERNKESPVFAPVYFPEELHRKAALEQDLAFWYGPRWQEVIPYTPAMQRYVKRLHEVGRTEPELLVAHAYTRYLGDLSGGQVLKKIAQKALDLPSSGEGLAFFTFPNIASATKFKQLYRSRMNSLEMTPAVRQRVIEEAKTAFLLNIQLFEELQELLTHDTKDQSPSRAPGLRQRASNKVQDSAPVETPRGKPPLNTRSQAPLLRWVLTLSFLVATVAVGLYAM
2Q32 Chain:A ((29-241))
--------RMADLSELLKEGTKEAHDRAENTQFVKDFLKGNIKKELFKLATTALYFTYSALEEEMERNKDHPAFAPLYFPMELHRKEALTKDMEYFFGENWEEQVQAPKAAQKYVERIHYIGQNEPELLVAHAYTRYMGDLSGGQVLKKVAQRALKLPSTGEGTQFYLFENVDNAQQFKQLYRARMNALDLNMKTKERIVEEANKAFEYNMQIFNELDQAG-------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2Q32.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113004 for 1646 contacts (-68.7/contact) +
2D Compatibility (PS) -23376 + (NN) -20110 + (LL) 3984
1D Compatibility (HY) -17600 + (ID) 5850
Total energy: -175956.0 ( -106.90 by residue)
QMean score : 0.606
(partial model without unconserved sides chains):
PDB file :
Tito_2Q32.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Q32-query.scw
PDB file :
Tito_Scwrl_2Q32.pdb
: