Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTIPAFHPGELNVYSAPGDVADVSRALRLTGRRVMLVPTMGALHEGHLALVRAAKRVPGSVVVVSIFVNPMQFGAGEDLDAYPRTPDDDLAQLRAEGVEIAFTPTTAAMYPDGLRTTVQP-GPLAAELEGGPRPTHFAGVLTVVLKLLQIVRPDRVFFGEKDYQQLVLIRQLVADFNLDVAVVGVPTVREADGLAMSSRNRYLDPAQRAAAVALSAALTAAAHAATA-G-AQAALDAARAVLDAAPGVAVDYLELRDI-GLGPMPL-NGSGRLLVAARLGTTRLLDNIAIEIGTFAGTDRPDGYRAILESHWRN |
1V8F Chain:A ((1-274)) | ----------MRTVSTVAELRAALPR---EG--VGFVPTMGYLHRGHLALVERARR-ENPFVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEAGVDLLFAPGVEEMYPEGFATRVQVEGPLTALWEGAVRPGHFQGVATVVARLFLLVQPQRAYFGEKDYQQLLVVRRMVRDLGFPVEVVGVPTVREEDGLALSSRNVYLSPETRKKAPVLYRALLAMREVAGQGGSVAEALRAGEEALRAVPEFRKDYLAIVHPETLLPLSDWVAGARGIVAGRFPEARLIDNLEV------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -191682 for 2232 contacts (-85.9/contact) +
2D Compatibility (PS) -30059 + (NN) -19956 + (LL) 2272
1D Compatibility (HY) -25600 + (ID) 6400
Total energy: -271425.0 ( -121.61 by residue)
QMean score : 0.656
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