Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRLEGRKFLVTGASGGIGQAIVKTMHKAGAILCVSGTKKETLEGVAKLYEKNIYI---LPCNLLNTEEVNQLINRASKLMGGLDGLVCNAGVTQDSLLLRMTDEAWQKVVDINLSSTFKLNREAYKKLTKNNWGRIINISSIIGLTGNAGQANYAASKAGIIAMSKSIAKEVASRNITVNCIAPGFMDTKMTKILTEEQKKKILDNIPMKRMGTGEEIAAGVLFLASDEAKYITGHVLNINGGLFM
4BO1 Chain:A ((25-268))
---LQGKVALVTGASRGIGQAIALELGRLGAVVIGTATSASGAEKIAETLKANGVEGAGLVLDVSSDESVAATLEHIQQHLGQPLIVVNNAG-----------DDEWFDVVNTNLNSLYRLSKAVLRGMTKARWGRIINIGSVVG----AGQTNYAAAKAGLEGFTRALAREVGSRAITVNAVAPGFIDTDMTRELPEAQREALLGQIPLGRLGQAEEIAKVVGFLASDGAAYVTGATVPVNGGMYM
General information:
TITO was launched using:
RESULT:
Template:
4BO1.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -140853 for 1881 contacts (-74.9/contact) +
2D Compatibility (PS) -24397 + (NN) -8638 + (LL) 1564
1D Compatibility (HY) -17600 + (ID) 5000
Total energy: -194924.0 ( -103.63 by residue)
QMean score : 0.613
(partial model without unconserved sides chains):
PDB file :
Tito_4BO1.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4BO1-query.scw
PDB file :
Tito_Scwrl_4BO1.pdb
: