Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKKSIVQRNLRRIKLCDQYGEKRERLKSIINNKNIPIGERFAAQNKLIKELPRDSS-KIRIRNRCALTGRPRGVYRKFGLCRIVLRGLCSFGKIPGITKSSW
4YHH Chain:N ((1-60))
-------------------------------------------ARKALIEKAKRTPKFKVRAYTRCVRCGRARSVYRFFGLCRICLRELAHKGQLPGVRKASW
General information:
TITO was launched using:
RESULT:
Template:
4YHH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31615 for 322 contacts (-98.2/contact) +
2D Compatibility (PS) -6039 + (NN) -2362 + (LL) 3320
1D Compatibility (HY) -4400 + (ID) 1450
Total energy: -42546.0 ( -132.13 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_4YHH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4YHH-query.scw
PDB file :
Tito_Scwrl_4YHH.pdb
: