Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKQIKALALFSGGLDSLLSMKLLIDQGIEVTALHFNIGFGGNKDKREYFENATAQIGAKLLVCDIREQFFNDV--LFKPKYGYGKYFNPCIDCHANMFRNAFYKMLELDADFVLSGEVLGQRPKSQRKEALNQVRKLVREVGEEARFDLILDRTQAS-----GEKPQFLDELLLRPMSAKLLEPTFMEKKGWVDREKLLDVSGRGRARQLQMIKDYGLKYYEKPGGGCLLTDIQVSNKIKNLKEYREMVFEDGVIVKNGRYFVLPHNARLVVARNEE-ENHKLDIEHPLMDKIELLGCKGPLSLVDKNASQEDKELAGRIALGYAKTLKNQAYLIQIGNEKRELY-----PLDKENAREYLFA----- |
4L5C Chain:A ((24-312)) | --KVKVGIIGGSGFDDPNLFK-------KVGVRQVTTPFGKPSDT-------------------LVEGFVGDVACVVLPRHGKGHLIPP----SEVNYRANVWALKDLGCTHILATNACGSLQEDLVP-------------GDFVVLNQFMDKTWGRENTFYGSKPDSLKGVLHMPMA----EP----------------FCERTRQILIQAARNKSINVYDKK------------TMDKSACIHPCVHAEGSAVTINGPRFSTRCESFIHKAMGLDIVNMTLVPEVSLAREAGL-SYASIAIVTDFDCWKSEEEHVC-VDMVLEQFRKSVVHVREILLEAVALIGAEDWTKTIEANKALVMSSRQDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4L5C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 54493 for 2230 contacts (24.4/contact) +
2D Compatibility (PS) -28787 + (NN) -8758 + (LL) 6864
1D Compatibility (HY) -5600 + (ID) 2750
Total energy: 15462.0 ( 6.93 by residue)
QMean score : 0.127
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