Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLSIGGLVDDASLTKFENPTIVEFRHIKKFITEYNALDHRPFTEKNDIEVAHEAQKNAAIVKGNDLYRFFSKLKQWAGADEKQNFRDLEEDFSLESFTHCTDFNPIEIYAYCISRSINNMENGVFLKYFLSYPIKYEKHQAEKIRESFERGLKKSLPRHVFDDEKTAKTFKVELRASEPCAYAISALKSYGFFKSEKLDKPVYYGVFDFGGGTTDFDFGKWEKRASPKFAYKMTHFSSGGDKYLGGENLLELLAWETYAKNFQTLKEKDIVIAKPNYDRIDTQLFGSFMQNSSGVRLNLQTIASQLRPFLENLDANIIEAIEE-------NE--NF-EIKGFEKDFKAMLFDRNGVETECDLKVDCKELLNLLKGKIED-GVANFFAGFSKVMAENID--DQCRAFHIFLGRNVSRSALVKQAFENAKEKQLKDYHQKTSKNDFKFIIYEPLGTEKSDKQILELTGEDVSNTPAYLKPTCKTGVAFGLLESRDKAQGIEMPSISSNPVFKYDLGIEIEGKFHAKIHRDSLKPNEY |
| 1NBW Chain:A ((382-576)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------RLQTEVVVGGVEANMAIAGALTTP--------GCAAPLAILDLGAGSTDAAIVNAE-------GQI-----TAVHLAGAGNMVSLLIKTELGLEDL---------------------------------------------SLAEAIKKYPLAKVESLFSIRHENGAVEFFREALSPAVFAKVVYIKEGELVPIDNASPLEKIRLVRRQAKEKVFVT----NCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSHYGVVAGQGNIRGTEGPRNAVATGLLLAGQAN-------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NBW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42882 for 1280 contacts (-33.5/contact) +
2D Compatibility (PS) -19149 + (NN) -6728 + (LL) 20156
1D Compatibility (HY) -800 + (ID) 1300
Total energy: -50703.0 ( -39.61 by residue)
QMean score : 0.322
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