Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTIDSSSKKDGFRMPGEFEKHAGCYIIWPERP-DN----------WR--LGAKPAQKAFVDVATAISH-FEPVTVVASSSQYV----NAR----------------------------------YMLSDE-------------------------IRVVEMDNDDAWVRDSGPTFVVNDSGDVRGVDWSFNSWGGLVDGLYFPWDKDDQVAQKICEL------ERKDRY------RLADFVLEGGSIHVDGEGTLVTTEECLLSEGRNPQLSKQQIEMVLKEYLN----LEKIIWLKRGIYLDETNGHVDNIFNYVRPGVVALAWTDDETD-P---------QYEI-----SKECFDILSNETDAKG-RKLEVHKINVPKPILITDEESKGVDAVEGTLPREEGDRLAASYINYYTAN-GGVIFPLFGDPNDELAREKLQQLYPNCEVVGVKAREILLGGGNIHCITQQVPR |
| 2A9G Chain:A ((6-413)) | ----------TKLGVHSEAGKLRKVMVCSPGLAHQRLTPSNCDELLFDDVIWVNQAKRDHFDFVTKMRERGIDVLEMHNLLTETIQNPEALKWILDRKITADSVGLGLTSELRSWLESLEPRKLAEYLIGGVAADDLPASEGANILKMYREYLGHSSFLLPPLPNTQFTRDTTCWI---YGG---VTLNPMY-W--------PARRQETLLTTAIYKFHPEFANAEFEIWYGDPDKDHGSSTLEGGDVMPIGNGVVLIGMG-----ER----SSRQAIGQVAQSLFAKGAAERVIVAGLP--KSRAAMHLDTVFSFCDRDLVTVFPEVVKEIVPFSLRPDPSSPYGMNIRREEKTFLEVVAES---LGLKKLRVVETG---------------------------REQWDDGNNVVCLEPGVVVGYDRNTY----TNTLLRK--AGVEVITISASELGRGRGGGHAMTCPIVR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A9G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55071 for 2491 contacts (-22.1/contact) +
2D Compatibility (PS) -31514 + (NN) -12266 + (LL) 3652
1D Compatibility (HY) -10000 + (ID) 2500
Total energy: -107699.0 ( -43.24 by residue)
QMean score : 0.300
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