Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKSKLICIIMVIAFQAHFTMTVKADSVGEEKLQNNTQAKKTPADLKALPDSCEAKDFYKNFKILDMTKDKLGVTHYTLALSSGGYLTDNDEIKVHVTPDNKITFINGDLQQGQLRITNQIKITEKNAIEKAFEAIGQSEAHVKSYVGNPVKEKEIILNSRTKRLVYNIKLIFAEPEVASWIVQVDVETGAILKKQNMLSEVERADTHKDFQALGKGANRLLQRPLHVMKINDLFYLVDRTHKGLIRTFDLKHNTDTSFGKVVSNKTNMFTDPEFSSAVDAHFYASEVYEYYKNVHQLESLDGKGGEIDSFVHYGLNCNNAFWDGQEILYGDGDKKNFKPFSCAKTIVGHELTHAVIQYSAGLEYEGQSGALNESFADVFGYFIA------PNHWLIGEDVCVRGSRDGRIRSIKDPDKYNQAAHMKDYESLPLTEEGDWGGVHYNSGIPNKAAY----------NTITKLGKEKTEQLYFRALKYYLTKKSQFTDAKKALQQAAKDLYGEDASK--KVAEAWEAVGVN |
4MZN Chain:E ((28-315)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YYLQDNTRGNGIFTYDAKYRT-TLPGSLWADADNQFFASYDAPAVDAHYYAGVTYDYYKNVHNRLSYDGNNAAIRSSVHYSQGYNNAFWNGSQMVYGDGDGQTFIPLSGGIDVVAHELTHAVTDYTAGLIYQNESGAINEAISDIFGTLVEFYANKNPD-WEIGEDVYTPGISGDSLRSMSDPAKYGDPDHY----SKRYTGTQDNGGVHINSGIINKAAYLISQGGTHYGVSVVGIGRDKLGKIFYRALTQYLTPTSNFSQLRAAAVQSATDLYGSTSQEVASVKQAFDAVGV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MZN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97030 for 2393 contacts (-40.5/contact) +
2D Compatibility (PS) -28954 + (NN) -9115 + (LL) 17720
1D Compatibility (HY) -19600 + (ID) 6200
Total energy: -143179.0 ( -59.83 by residue)
QMean score : 0.502
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