Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKKWKRDHLGMVMGILNVTPDSFSDGGKYMQVEEAVARALQMAEDGAAIIDVGGISTRPGFSEVTPDEELARIIPVIKAVRTKLPDIWISVDSWRAEVAEQAILAGADMINDQWGAKKEPKIAEVAAKYDVPICLMHNRENAQ--------YDNFLEDVKKDLLESIAIAKAASVPDEHIILDPGFGFVKTP-AQNLEVLRRIDEIV-----ALGYEVLLGTSRKSTIGLVLGT-TPGDRMEGTGATTVYGFSKGCTITRVHDVLPIARMVRMTDAITGKLDITNL |
| 2Y5S Chain:A ((16-290)) | -FELTFE-RPLVMGILNATP----------ARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRP--LNVPLSIDTYKPAVMRAALAAGADLINDIWGFRQ-PGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICVDPGFGFGKAVVDDNYALLAALPDTAPARPDGRAYPILAGMSRKSMLGAVIGGKPPLERVAASVAAALCAVERGAAIVRVHDVAATVDALSVWNAVRAA------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y5S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148081 for 2126 contacts (-69.7/contact) +
2D Compatibility (PS) -27701 + (NN) -17277 + (LL) 960
1D Compatibility (HY) -14000 + (ID) 4450
Total energy: -210549.0 ( -99.04 by residue)
QMean score : 0.489
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