Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIRIGQGYDVHKLAYDRDLIIGGVKIPYEKGLLGHSDADVLLHAITDAIIGAIGAGDIGHFFPDTDMVFKDADSAELLAEIWQKVEADGFRLGNLDATIIAEKPKMAPYVEQMKLRIAELLHADSAQVNVKATTTEKLGFTGREEGIASLAVVLLEK
3P0Z Chain:C ((24-179))
-FRIGQGYDVHQLVPGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHF------FKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR
General information:
TITO was launched using:
RESULT:
Template:
3P0Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -115106 for 1271 contacts (-90.6/contact) +
2D Compatibility (PS) -16430 + (NN) -9783 + (LL) 368
1D Compatibility (HY) -13200 + (ID) 4400
Total energy: -158551.0 ( -124.75 by residue)
QMean score : 0.622
(partial model without unconserved sides chains):
PDB file :
Tito_3P0Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P0Z-query.scw
PDB file :
Tito_Scwrl_3P0Z.pdb
: