Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLKKHSERKFDLITVGRACIDLNAVEYNRPMEETMTFSKYVGGSPANIAIGTAKLGLKVGFIGKISDDQHGRFIEKYMRDLAINTDGMVKDTEGRKVGLAFTEIKSP--DECSILMYRENVADLYLTPEEISEDYIKEARVLLISGTALAQSP-SREAVLKAVSLARKNDVVVAFELDYRPYTWKNSEETAVYYSLVAEQAD--VIIGTRDEFDMMENQVGGKNEATKAYLFQHQAKIVVIKHGVEGSFAYTKAGETFQAQAYKTKVLKTFGAGDSYASAFLYGLFSDESIETALKYGSAAASIVVSKHSSSDAMPTADEIKALIAQAE |
| 2V78 Chain:A ((2-312)) | ----------VDVIALGEPLIQFNSFNPGP-LRFVNYFEKHVAGSELNFCIAVVRNHLSCSLIARVGNDEFGKNIIEYSRAQGIDTSHIKVD-NESFTGIYFIQRGYPIPMKSELVYYRKGSAGSRLSPEDINENYVRNSRLVHSTGITLAISDNAKEAVIKAFELAKS----RSLDTNIRPKLWSSLEKAKETILSILKKYDIEVLITDPDDTKILLDVTD--PDEAYRKYKELGVKVLLYKLGSKGAIAYKDNV-KAFKDAYKVPVEDPTGAGDAMAGTFVSLYLQGKDIEYSLAHGIAASTLVITVRGDNELTPTLEDAERFLNEFK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V78.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160589 for 2841 contacts (-56.5/contact) +
2D Compatibility (PS) -32549 + (NN) -7347 + (LL) 852
1D Compatibility (HY) -14400 + (ID) 3950
Total energy: -217983.0 ( -76.73 by residue)
QMean score : 0.538
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