Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNKITERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYVYLAFEVGDKELKDVVQGFRAMNLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVNDDGVLTGHITDGTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFEGETLLPSADMLRPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIWTHKEMPVDYIKEILF |
| 2HK9 Chain:A ((7-270)) | -------MINAQTQLYGVIGFPVKHSLSPVFQNALIRYAGLNAVYLAFEINPEELKKAFEGFKALKVKGINVTVPFKEEIIPLLDYVEDTAKEIGAVNTVKFENGKAYGYNTDWIGFLKSLKSLIPEVKEKSILVLGAGGASRAVIYALVKEGA-KVFLWNRTKE---KAIKLAQKFPLEV-----------VNSPEEVIDKVQVIVNTTSVGLKDEDPE--IFNYDLIKKDHVVVDIIYK--ETKLLKKAKEKGAKLLDGLPMLLWQGIEAFKIWNGCEVPYSVAERSV- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2HK9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -148034 for 2270 contacts (-65.2/contact) +
2D Compatibility (PS) -28759 + (NN) -6941 + (LL) 2080
1D Compatibility (HY) -20800 + (ID) 4650
Total energy: -207104.0 ( -91.24 by residue)
QMean score : 0.607
|
|
|