Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEANEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAENLGTKMTTKYSDEGLLITIRDDILFQSG-SAELSAGKREIAKEIGELFAQGKG--TMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANREKNRRVEIMVRPINRDTLDEDE |
| 3S0Y Chain:A ((42-175)) | ---------------------------------------------------------------------------------------------------------------------------------------GSVLEQIDQGSILKLPSNLLFENATSDAINQDMMLYIERIAKIIQKLPKRVH--INVRGFTDDTPLVKTRFKSHYELAANRAYRVMKVLI--QYGVNPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDL----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3S0Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20547 for 939 contacts (-21.9/contact) +
2D Compatibility (PS) -14451 + (NN) -9887 + (LL) 11452
1D Compatibility (HY) -7600 + (ID) 1850
Total energy: -42883.0 ( -45.67 by residue)
QMean score : 0.512
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