Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKEIIQTSSAPKALGPYSQAVKVNGLIFTSGQLGINPATGELVV-GATKQAEQAFKNLAAVLEEAGSGLDKIIKATVFFKDLNEFKAVNEVYATFFSSDFPARSAFQVAKLPLDAEIEIEVIAEA
1XRG Chain:A ((32-156))
-YIEVVKTNKAPEAIGPYSQAIVTGSFVYTSGQIPINPQTGEVVDGGIEEQAKQVLENLKNVLEAAGSSLNKVVKTTVFIKDMDSFAKVNEVYAKYFSEPYPARSCVEVSKLPKGVLIEIEAVAIK
General information:
TITO was launched using:
RESULT:
Template:
1XRG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40782 for 945 contacts (-43.2/contact) +
2D Compatibility (PS) -13716 + (NN) -7319 + (LL) 208
1D Compatibility (HY) -12800 + (ID) 3200
Total energy: -77609.0 ( -82.13 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_1XRG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XRG-query.scw
PDB file :
Tito_Scwrl_1XRG.pdb
: