Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKDIDWSNLGFSYIKTDKRYISYWKDGEWDEGALTEDNTLHISEGSTALHYGQQCFEGLKAYRCKDGSINLFRPDRNAARIQKSCERLLMPHIPTEKFIDAVMQVVRANEEFVPPYGTGATLYLRPFVIGVGDNIGVHAAPEYIFSVFCSPVGPYFKGGMAPTNFIVSDFDRAAPNGTGAAKVGGNYAASLLPGQAAKERNFGDCIYLDPATHTK--IEEVGSANFFGITKDD-KFVTPYSPSILPSITKYSLLYLAE-HRLGLEAVEGDVYIDKLDEFKEAGACGTAAVITPIGGIQTKD-DFHVFHSETEVGPVTKRLFDELCGIQFGDVEAPEGWIYKVK |
| 3UZO Chain:A ((24-358)) | ----IDWSTLGFSYIRTDLRYLAHWKDGEWDAGTLTEDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPDQNAARMRMSCRRLLMPELSDEQFIDACLQVVRANEHFLPPYGTGGSLYLRPFVIGVGDNIGVRTAPEFIFSVFCVPVGPYFKGGLTPTNFITSDYDRAAPHGTGAAKVGGNYAASLLPGYEAKKRDFADVIYLDPAT--HTTIEEAGAANFFAITQDGQKFVTPQSPSILPSITKYSLLWLAEHR-LGLEVEEGDIRIDELGKFSEAGACGTAAVITPIGGIQHGDDFHVFY-SESEPGPVTRRLYDELVGIQYGDKEAPEGWIVKV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UZO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -188031 for 2797 contacts (-67.2/contact) +
2D Compatibility (PS) -35659 + (NN) -11070 + (LL) 472
1D Compatibility (HY) -39200 + (ID) 12700
Total energy: -286188.0 ( -102.32 by residue)
QMean score : 0.524
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