Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VHNPNLFNTLKQNEYTLPKD--------------PNTSNEIIDTML---SYLSSTDSEL-----RDNIAYNIFSEWLVVQDNLTTEQKMRIYN-YAVNKNNLLFKINIIDSDAVFQRSFLALIIALLLENNKVHNFLTDSEIRETLNLLIELLKNEKNTHSFIEEKGWAHCIAHTADALDELIYQRTISEIDVKKIMTTIAFFYKTNTKMLTGEEDERLSNILITALFEQKISNEEVKNWLISISETIPSYLPEIPLINIKQFTQTLLI-----------KLTVLNYD---VDFSLF---------PIVTRYIRKNDDNSTNKKAL--------------------------------------------------------------------- |
| 2WZP Chain:R ((1-375)) | MLEANVYDNFNPNYYNISDFSMPNGKKEKRGLPIPKARCQVINYELWETGYLYTSSATLTVSVEVGDIVQILFPEVVPIEEALGKKKKLNLDMVYLVTDVDE-------SNKATLKNYFWAMI-----ESLDVPNAITKTTNFAIIDYLIDPNKNNLMSYGYF---FNSSIFAGKATINRK--AETSSAHDVAKRIFSKVQFQPTTTIQHAPSETDPR---NLLFINFASRNWNRKRITTRVDIKQSVTMDTETIVERSAYNFAVVFVKNKATDDYTDPPKMYIAKNNGDVIDYSTYHGDGTDLPDVRTAKTLFYDRDDHGNPPELSTIKVEISPSTIVTRLIFNQNELLPLYVNDLVDIWYEGKLYSGYIADRVKTEFNDRLIFVESGDKPNVI |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WZP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -18569 for 1736 contacts (-10.7/contact) +
2D Compatibility (PS) -27138 + (NN) 4269 + (LL) 2500
1D Compatibility (HY) -8400 + (ID) 2450
Total energy: -49788.0 ( -28.68 by residue)
QMean score : 0.147
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