Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGEIIDGKKLAKEIQEKVTREVAELV-KEGKQPGLAVVLVGDNQASRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEHISEEKVIDTISFDKDVDGFHPVNVGNLFIGKD-SFVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDYIKPGAIVIDVGMDRDENNKLCGDVDFDDVVQEAGFITPVPGGVGPMTITMLLANTLKAAKRIWKMN |
3L07 Chain:A ((4-284)) | -MILIDGKSLSKDLKERLATQVQEYKHHTAITPKLVAIIVGNDPASKTYVASKEKACAQVGIDSQVITLPEHTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPEKDVDGFHPTNVGRLQLRDKKCLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKSHTTKADILIVAVGKPNFITADMVKEGAVVIDVGINHVDG-KIVGDVDFAAVKDKVAAITPVPGGVGPMTITELLYNTFQCAQELN--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L07.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -173845 for 2382 contacts (-73.0/contact) +
2D Compatibility (PS) -30244 + (NN) -12577 + (LL) 320
1D Compatibility (HY) -26000 + (ID) 6700
Total energy: -249046.0 ( -104.55 by residue)
QMean score : 0.653
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