Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSGLTKIEIITRPNRFHLFQKELAKIGVSGLTVTKALGTGLEKGFIELYRGTKKESNIHERMKIEIVVSTVPVEDVLRVVKETLRTGEPGDGKVFIYPLAEVVKISTGETGIDALQDKPSK
2O66 Chain:B ((11-121))
-SKFYKVEAIVRPWRIQQVSSALLKIGIRGVTVSDVRGF----------------DKFVAKVKMEIVVKKDQVESVINTIIEGARTGEIGDGKIFVLPVSDVIRVRTGERG----------
General information:
TITO was launched using:
RESULT:
Template:
2O66.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55427 for 601 contacts (-92.2/contact) +
2D Compatibility (PS) -10653 + (NN) -6683 + (LL) 1580
1D Compatibility (HY) -8800 + (ID) 1950
Total energy: -81933.0 ( -136.33 by residue)
QMean score : 0.628
(partial model without unconserved sides chains):
PDB file :
Tito_2O66.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2O66-query.scw
PDB file :
Tito_Scwrl_2O66.pdb
: