Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LKRKVGIIGTGHVGSDVAFSLVTQGICDEIVLIDKIETKAESEALELRDMASMTNSYTMITSNDWSALGDADVIVMAVGPETLLREDRMEELVETSRSVAEIVPKIIASGFQGIFVNITNPCDVITMLIQKLSGFDHSRVFGTGTSLDTARMRRVVGEALHINPKSVEGYVLGEHGESQFVAWSTVKIGGVSIKDY-----KTTTSLDLPALKDAVRGGGWNILTGKGWTSFGIATAVAGIVDAILTDAKQVFPLAVFSEKT----STYIGQPALIGANGVIDILEPPLTETEKINFNESAEIIKNAFQLI |
2V7P Chain:C ((2-304)) | ---KVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATPFAHP-VWVRAGSYGDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATNPVDVMTQVAYRLSGLPPGRVVGSGTILDTARFRALLAEYLRVAPQSVHAYVLGEHGDSEVLVWSSAQVGGVPLLEFAEARGRALSPEDRARIDEGVRRAAYRIIEGKGATYYGIGAGLARLVRAILTDEKGVYTVSAFTPEVEGVLEVSLSLPRILGAGGVEGTVYPSLSPEEREALRRSAEILKEA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V7P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192212 for 2684 contacts (-71.6/contact) +
2D Compatibility (PS) -30829 + (NN) -3039 + (LL) 1064
1D Compatibility (HY) -22400 + (ID) 5050
Total energy: -252466.0 ( -94.06 by residue)
QMean score : 0.570
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