Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSLEKVNEAVAKIRESYTGTPKIGLILGSGLGVLADEVNQPIKLSYSEIPHFPVSTVEGHAGQFVFGELENKEVVAMQGRFHFYEGYSMQDVTFPVRVMKELGVEVLIVTNAAGGVNELYSAGDLMLISDHIN---FTGTSPLIGPNDEHFGPRFPDMSEAYNLALRVDARLIAQEL--NLTIREGVYAGFSGPTYETPAEIQMMRTLGADAVGMSTVPEVIIANHAGLRVLGISCITNMAAGILD--QPLSHTEVIETTDQVRSTFLQYVKAIVAKIS
4GKA Chain:D ((60-317))--------------------PQVAIICGSGLGGLTDKLTQAQIFDYSEIPNFPRSTVPGHAGRLVFGFLNGRACVMMQGRFHMYEGYPLYKVTFPVRVFHLLGVDTLVVTNAAGGLNPKFEVGDIMLIRDHINLPGFSGQNPLRGPNDERFGDRFPAMSDAYDRTMRQRALSTYKQMGEQRELQEGTYVMVAGPSFETVAECRVLQKLGADAVGMSTVPEVIVARHCGLRVFGFSLITNKV--IMDYE------------KQAAQKLEQFVSILMASI-


General information:
TITO was launched using:
RESULT:

Template: 4GKA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -178317 for 1970 contacts (-90.5/contact) +
2D Compatibility (PS) -24979 + (NN) -6477 + (LL) 2564
1D Compatibility (HY) -24800 + (ID) 6450
Total energy: -238459.0 ( -121.05 by residue)
QMean score : 0.606

(partial model without unconserved sides chains):
PDB file : Tito_4GKA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4GKA-query.scw
PDB file : Tito_Scwrl_4GKA.pdb: