Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LPNEVYDVTIIGGGPIGLFSAFYSGLRSMKTKIIDAEPAVGGKVRYFFPEKIIRDIGGIP-AITGENLVANLKQQAETFHPTIVCSERVVDVTKLAD-G--TFQLTSHNGSIHFSKTIVIATGSGTFEVNKLEALHAEDFP-FAIHYDVKNI-EQFRDKVVVVSGGGNSAIDWAQTLEPIAKKVHLIYRGEDFKAH-EESVRELKNSRVEIHIHHEISELIGTNNQLTEITVCCNQTQTTKTIETEALFINHGVKVDLGTMAEWGFKQAD-FGIVVDDEMKTTVPGIFACGDSATYPRKIRIIAAGLHEGPIAINSAKKYLEPTAADEAMISTHHESFIG |
| 2Q7V Chain:A ((5-313)) | -TAHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGM-PGGQIAWSE--E-VENFPGFPEPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGY-NGEYRAKAVILATGA---DPRKLGIPGEDNFWGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRANKVAQARAFANPKMKFIWDTAVEEIQGA-DSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKD-TVSLRDDGYVDVRDEIYTNIPMLFAAGDVSDYIY--RQLATSVGAGTRAAMMTERQLAA----------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2Q7V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -188122 for 2632 contacts (-71.5/contact) +
2D Compatibility (PS) -32650 + (NN) -10388 + (LL) 2012
1D Compatibility (HY) -12400 + (ID) 3900
Total energy: -245448.0 ( -93.26 by residue)
QMean score : 0.524
|
|
|