Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDDCIFCKIVRGEIPSAKVYEDDEVYAFLDLGQVTEGHTLVIPKKHARNTFDLPDETAAELFRRVPKIARALKEALPIQGLNILNNNEEVAFQSVFHCHIHLIPRYSKSDDFGLKWKDNADWYTQERYQEIAELIAAKVD
3LB5 Chain:A ((28-161))
-NNNIFAKLIRNEIPSVRVYEDDDVIAFMDIMPQAPGHTLVIPKKGSRNLLDADTETLFPVIKAVQKIAKAVKKAFQADGITVMQFNEAASQQTVYHLHFHIIPRMEGI-EL-------ITP--TEILEENAKKIRAAL-
General information:
TITO was launched using:
RESULT:
Template:
3LB5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77437 for 953 contacts (-81.3/contact) +
2D Compatibility (PS) -13928 + (NN) -6430 + (LL) 332
1D Compatibility (HY) -10400 + (ID) 2700
Total energy: -110563.0 ( -116.02 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_3LB5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LB5-query.scw
PDB file :
Tito_Scwrl_3LB5.pdb
: