Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAKKVVTDLDLKDKKVLVRVDFNVPMKDGKITNDNRIVAALPTIEYILEQNGK-AILFSHLGKVKTEEDKEGKSLRPVAVRLSELLGKEVKFVPTTRGPELEKAIDELKDGEVLLFENTRFEDIDGK----------KESKNDPELGKYWASLGDVFVNDAFGTAHRAHASNVGIASNLE-SAAGFLMEKEIKFIGGVVDNPARPLVAILGGAKVSDKIGVIENLLTKADKVLVGGGMTFTFMAAQ-GQEIGKSLLEADKVELAKGLLEKA--GDK-LVLPVDAVVSKEFSNDAPF-HTVSADSIPADEMGLDIGQATIDLFTKELQGAKTVVWNGPMGVFELSNFAKGTIGVCEAIANLT--DATTIIGGGDSAAAAMDLGFADKFTHISTGGGASLEYLEGKELPGVASISDK
1QPG Chain:A ((4-414))-SKLSVQDLDLKDKRVFIRVDFNVPLDGKKITSNQRIVAALPTIKYVLEHHPRYVVLASHLGQPNGERN-EKYSLAPVAKELQSLLGKDVTFLNDCVGPEVEAAVKASAPGSVILLENLRYHIEEEGSRKVDGQKVKASKEDVQKFRHELSSLADVYINDAFGTAHRAHSSMVGFD--LPQRAAGFLLEKELKYFGKALENPTRPFLAILGGAKVADKIQLIDNLLDKVDSIIIGGGMAFTFKKVLENTEIGDSIFDKAGAEIVPKLMEKAKAKGVEVVLPVDFIIADAFSADANTKTVTDKEGIPAGWQGLDNGPESRKLFAATVAKAKTIVWNGPPGVFEFEKFAAGTKALLDEVVKSSAAGNTVIIGGGDTATVAKKYGVTDKISHVSTGGGASLELLEGKELPGVAFLSEK


General information:
TITO was launched using:
RESULT:

Template: 1QPG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -198082 for 3466 contacts (-57.2/contact) +
2D Compatibility (PS) -42212 + (NN) -14094 + (LL) 164
1D Compatibility (HY) -36000 + (ID) 9800
Total energy: -300024.0 ( -86.56 by residue)
QMean score : 0.544

(partial model without unconserved sides chains):
PDB file : Tito_1QPG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1QPG-query.scw
PDB file : Tito_Scwrl_1QPG.pdb: