Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKKLVATAPRVAVLVEYNDREVLEDEVKIKVQFASPKHGTEVVDFRGISPFIDEEFSPEWNLFVSRETNSARGIVFGEFQLGNMVVGEVVERGSKVTEYALGDIVCSYGPIMETVIVKAVDNYK-LRKLPKGANWKNAVCYDPAQFAMSGV--RDAHVRAGDYVVVV-GLGAIGQIAIQLAKKAGASVVIGVDPLSHRR-EIAEKHGADATFDPITTDVGLEVKRLTGKLGADSIIETSGNAAALQAALRGIAYGGTISYVAFAKPFPEGFNLGREAHFNNAKIVFSRAASEPNPDYPRWDRKRIEETCWELLMNGYLDCSDIIDPVVPFADSAESYMKYVDQQPDLSIKMGITL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 3SLK Chain:A ((22-772)) | ARLYRLSWPTVQLPTSAQPPSCVLLGTSEVSADIQVYPDLRSLTAALDAGAEPPGVVIAPTPPGGGRTADVRETTRHALDLVQGWLSDQRLNESRLLLVTQGAVAVEPGEPVTDLAQAALWGLLRSTQTEHPDRFVLVDVPEPAQLLPALPGVLACGEPQLALRRGGAHAPRLAGLGSDDVLPVPDGTGWRLEATRPGSLDGLALVDEPTAT------APLGDGEVRIAMRAAGV---------------------------NFRDALIALGMYPGVASLGSEGAGVVVETGPGVTGLAPGDRVM--GMIPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAVELSREHLASSR----TCDFEQQFLGATGGRGVDVVLNSLAGEF-ADASLRMLPRGG-----RFLELGKTDVRDPVEVADAHPGVSYQA------FDTVEAGPQRIGEMLHELVELFEGRVLEPLPVTAWDVRQAPEALRHLSQARHVG-KLVLTMPPVWDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDPDVALVLFSSVSGVLGSGGQGNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAEQDRLARSGLLPISTEEGLSQFDAACGGAHTVVAPVRFSRLAIKFSVLQG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SLK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113439 for 2527 contacts (-44.9/contact) +
2D Compatibility (PS) -32321 + (NN) -8423 + (LL) 3012
1D Compatibility (HY) -2400 + (ID) 3500
Total energy: -157071.0 ( -62.16 by residue)
QMean score : 0.344
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