Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNLLIMGLPGAGKGTQAAKIVEEFGVAHISTGDMFRAAMANQTEMGRLAKSYIDKGELVPDEVTNGIVKERLAEDDIAEKGFLLDGYPRTIEQAHALDATLEELGLRLDGVINIKVDPSCLIERLSGRIINRKTGETFHKVFNPPV-----DYKEEDYYQREDDKPETVKRRLDVNIAQGEPILEHYRKLGLVTD-----IEGNQEITEVFADVEKALLELK
4X8O Chain:B ((1-213))
MRIILLGAPGAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVIALVKERIAQED-CRNGFLLDGFPRTIPQADA----MKEAGINVDYVLEFDVPDELIVDRIVGRRVHAPSGRVYHVKFNPPKVEGKDDVTGEELTTRKDDQEETVRKRLVEWHQMTAPLIGYYSKEAEAGNTKYAKVDGTKPVAEVRADLEKILG---
General information:
TITO was launched using:
RESULT:
Template:
4X8O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50303 for 1578 contacts (-31.9/contact) +
2D Compatibility (PS) -21936 + (NN) -7683 + (LL) 956
1D Compatibility (HY) -16000 + (ID) 4350
Total energy: -99316.0 ( -62.94 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_4X8O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4X8O-query.scw
PDB file :
Tito_Scwrl_4X8O.pdb
: