Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTETLLSIKDLSITFTQYGRFLKPFQSTPIQALNLEIKKGELLAIIGASGSGKSLLAHAIMDILPKNASVTGDMIYRGQSLNSKRIKQLRGKDITLIPQSVNYLDPSMKVKHQVRLGIS------ENSKATQEGLFQQFGLKESDGDLYPFQLSGGMLRRVLFTTCISDKVSLIIADEPTPGLHPDALQMVLDQLRSFADK-GISVIFITHDIVAASQIADRITIFKEGKAIETA-PASFFSGNGEQLQTEFARS--LLRSLPQQEFLKGVTHDLRG------------------------------------------------------------------------------------- |
1Z47 Chain:A ((11-355)) | -GSMTIEFVGVEKIYPG--------GARSVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPT---KGDVWIGGKRVTDLPPQK---RNVGLVFQNYA-LFQHMTVYDNVSFGLREKRVPKDEMDARVRELLRFMRLESYANR-FPHELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELRTFVRQVHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTLFVASFIGESNVWTRAVQNGRIEVAGAALPVDPAVSEGSEVAVVVRPKDVELQPASEREAHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHRWSPGAWVHMNVTRWFIFPR |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z47.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136032 for 1968 contacts (-69.1/contact) +
2D Compatibility (PS) -27051 + (NN) -13990 + (LL) 1272
1D Compatibility (HY) -15600 + (ID) 2550
Total energy: -193951.0 ( -98.55 by residue)
QMean score : 0.491
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