Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MSKKLISIVDVKDYVGQEVTIGAWVANKSGKGKIAFVQLRDGSAFFQGVAFKPNFIEKYGEESGLEKFDVIKRLNQETSVYVTGIVKEDER---SKFGYELDITDLEVIG-------------ESHEYPITPKEHGTDFLMDNRHLWLRSRKQMAVMQIRNAIIYSTYEFFDQNGFIKFDSPILSENAAEDSTELFETDYFGKPAFLSQSGQLYLEAGAMA-LGRVFDFGPVFRAEKSKTRRHLTEFWMMDAEYSFL-SHEESLDLQEAYVKALIQGVLDRAPQALDILERDVE--ALKRYIAEPFKRVSYDDAITLLQ--EHEADEDTDYEHLEH------GDDFGSPHETWISNYFGV-----PTFVVNYPASFKAFYMKPVPGNPERVLCADLLAPEGYGEIIGGSMREDDYDALVAKMDELGMDK-----SEYDFYLDLRKYGSVPHGGFGIGIERMVTFVAGTKHIREAIPFPRMLHRIKP |
| 1B8A Chain:A ((1-438)) | MYRTHYSSEIT------E-ELNG--QKVKVAGWVWEVKDLGGIKFLWIRDRDGIVQITAPK-----KKVDPELFK---LIPKLRSEDVVAVEGVVNFTP-KAK--LGFEILPEKIVVLNRAETPLPLDPTGK---------VKAELDTRLNNRFMDLRRPEVMAIFKIRSSVFKAVRDFFHENGFIEIHTPKIIATATEGGTELFPMKYFEEDAFLAESPQLYKEIMMASGLDRVYEIAPIFRAEEHNTTRHLNEAWSIDSEMAFIEDEEEVMSFLERLVAHAINYVREHNAKELDILN--FELEEPKL----PFPRVSYDKALEILGDL---------------GKEIPWGEDIDTEGERLLGKYMMENENAPLYFLYQYPSEAKPFYIMKYDNKPEICRAFDLEY--RGVEISSGGQREHRHDILVEQIKEK----GLNPE-SFEFYLKAFRYGMPPHGGFGLGAERLIKQMLDLPNIREVILFPRDRRRLTP |
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General information:
TITO was launched using:
| RESULT:
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Template: 1B8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -164150 for 3024 contacts (-54.3/contact) +
2D Compatibility (PS) -40811 + (NN) -3045 + (LL) 2812
1D Compatibility (HY) -28800 + (ID) 6950
Total energy: -240944.0 ( -79.68 by residue)
QMean score : 0.377
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