Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNYAQLIKHYGQLLEACGEEVENFIYVLKDLKQWSTTDYLLNQNSSVSDTDQQLMENIFQQLKKHRSPQYITGKAYFRDLIFFVDERVLIPRPETEELVDLILSENKVEDCSVLDIGTGSGAIAISLKKERPSWDVLASDISVSALDLAKENANNCD--AEVTFIESDVFSNIS--GKFDIIVSNPPYISYNDKDEVGKNVLASEPHSALFADEEGLAIYRKIIENSREYLQPRGKLYFEIGYKQGDDLRSLLKRYFPNNRCRVLKDIFGKDRMVVLDNE |
| 3TM4 Chain:A ((205-344)) | ------------------------------------------------------------------------------------------------SIANAMIELAELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPYG------S-------M-----------IPDLYMKFFNELAKVLEKRGVFITTE----KKAIEEAIAENGFEIIHHRVIGHGGLMVHLYVVKL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TM4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43998 for 1010 contacts (-43.6/contact) +
2D Compatibility (PS) -14234 + (NN) -8992 + (LL) 8728
1D Compatibility (HY) -3600 + (ID) 1450
Total energy: -63546.0 ( -62.92 by residue)
QMean score : 0.502
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