Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNTAPFIAIEGPIGAGKTTLATMLSQKF-GFPMINEIVED---------NPYLDKFYDNIKEWSFQLEMFFLCHRYKQLEDTS---------DHFLKKGQPVIADYHIYKNVIFAERTLSPHQLEKYKKIYHLLTD---DLPKPNFIIYIKASLPTLLHRIEKRGRPFEKKIETSYLEQLISDYEVAIKQLQE-----ADPELTVLTVDGDSKDFVLNKSDFERIAAHVKELIV
1P5Z Chain:B ((23-260))
--RIKKISIEGNIAAGKSTFVNILKQLCEDWEVVPEPVARWCNVQSTNGGNVLQMMYEKPERWSFTFQTYACLSRIRAQLASLNGKLKDAEKPVLFF-ERSVYSDRYIFASNLYESECMNETEWTIYQDWHDWMNNQFGQSLELDGIIYLQATPETCLHRIYLRGRNEEQGIPLEYLEKLHYKHESWLLHRTLKTNFDYLQEVPILTLDVNE-DF---KDKYESLVEKVKEFL-
General information:
TITO was launched using:
RESULT:
Template:
1P5Z.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96538 for 1493 contacts (-64.7/contact) +
2D Compatibility (PS) -21164 + (NN) -8727 + (LL) 736
1D Compatibility (HY) -16400 + (ID) 2650
Total energy: -144743.0 ( -96.95 by residue)
QMean score : 0.517
(partial model without unconserved sides chains):
PDB file :
Tito_1P5Z.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P5Z-query.scw
PDB file :
Tito_Scwrl_1P5Z.pdb
: