Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMKHDIEKVLISEEEIQKKVKELGAELTSEYQD------TFPLA-IGVLKGALPFMADLIKHIDTY---LEMDFMDVSSYGNSTVSSGEVKIIKDLDTSVEGRDILIIEDIIDSGLTLSYLVELFRYRKAKSIKIVTLLDKPSGRKADIKADFVGFEVPDAFVVGYGLDYAERYRNLPYIGVLKPAVYES
1P17 Chain:D ((9-190))
------EKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLRGSFMFTADLCRALCDFNVPVRMEFICVSSY---------VRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPFSADYVVANIPNAFVIGYGLDYDDTYRELRDIVVLRPEVY--
General information:
TITO was launched using:
RESULT:
Template:
1P17.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -138238 for 1250 contacts (-110.6/contact) +
2D Compatibility (PS) -17397 + (NN) -3659 + (LL) 568
1D Compatibility (HY) -22000 + (ID) 3700
Total energy: -184426.0 ( -147.54 by residue)
QMean score : 0.565
(partial model without unconserved sides chains):
PDB file :
Tito_1P17.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P17-query.scw
PDB file :
Tito_Scwrl_1P17.pdb
: