Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAQHTIDQTQVIHTKPSALSYKEKTLVMGILNVTPDSFSDGGKYDSLDKALLHAKEMIDDGAHIIDIGGESTRPGAECVSEDEEMSRVIPVIERITKELGVPISVDTYKASVADEAVKAGASIINDIWGAKHDPKMASVAAEHNVPIVLMH--------NRPERNYNDLLPDMLSDLMESVKIAVEAGVDEKNIILDPGIGFAKTYHDNLAVMNKLEIFSGLGYPVLLATSRKRFIGRVLDLP-PEERAEGTGATVCLGIQKGCDIVRVHDVKQIARMAKMMDAMLNKGGVHHG
2DZB Chain:A ((27-273))
----------------------DRVRLLGVLNLTP-------------RALERAREMVAEGADILDLGAES----------EEEKRRLLPVLEAVLS-LGVPVSVDTRKPEVAEEALKLGAHLLNDVTGLR-DERMVALAARHGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAGVPQ--VVLDPGFGFGKLLEHNLALLRRLDEIVALGHPVLVGLSRKRTIGELSGVEDPAQRVHGSVAAHLFAVMKGVRLLRVHDVR---------------------
General information:
TITO was launched using:
RESULT:
Template:
2DZB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -142727 for 1807 contacts (-79.0/contact) +
2D Compatibility (PS) -23345 + (NN) -11756 + (LL) 3700
1D Compatibility (HY) -19600 + (ID) 4550
Total energy: -198278.0 ( -109.73 by residue)
QMean score : 0.614
(partial model without unconserved sides chains):
PDB file :
Tito_2DZB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2DZB-query.scw
PDB file :
Tito_Scwrl_2DZB.pdb
: