Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIAYIALGSNIGDRETYLRQAVALLHQHAAVTVTKVSSIYETDPVGYEDQAQFLNMAVEIKTSLNPFELLELTQQIENELGRTRE-VRWGPRTADLDILLFNRENIETEQLIVPHPRMYERLFVLAPLAEICQQVEKEATSAETDQEGVRVWKQKSGVDEFVHSES
3IP0 Chain:A ((1-139))
--TVAYIAIGSNLASPLEQVNAALKALGDIPESHILTVSSFYRTPPLGPQDQPDYLNAAVALETSLAPEELLNHTQRIELQQGRVRKAERWGPRTLDLDIMLFGNEVINTERLTVPHYDMKNRGFMLWPLFEIAPELVFPD---------------------------
General information:
TITO was launched using:
RESULT:
Template:
3IP0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -93495 for 1066 contacts (-87.7/contact) +
2D Compatibility (PS) -14349 + (NN) -3369 + (LL) 1752
1D Compatibility (HY) -9600 + (ID) 3200
Total energy: -122261.0 ( -114.69 by residue)
QMean score : 0.584
(partial model without unconserved sides chains):
PDB file :
Tito_3IP0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3IP0-query.scw
PDB file :
Tito_Scwrl_3IP0.pdb
: