Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKEKFDRSKSHANIGTIGHVDHGKTTL-------TAAITTVLHKK--SGKGTAMAYDQIDGAPEERERGITISTAHVEYETETRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLSKNVGVPYIVVFLNKCDMVD-DEELLELVEMEVRDLLSEYDFPGDDVPVVKGSALK----ALEGDAEWEAKIFELMDAVDEYIPTPERDTEKPFMMPVEDVFSITGRGTVATGRVERGQVKVGDEV---EIIGLQEENKKTTVTGVEMFRKLLDYAEAGDNIGALLRGVSREEIQRGQVLA---KPGTIT-PHSKFKAEVYVLSKEEGGR--HTPFFSNYRPQFYFRTTDV-------TGIIHLPEGVEMVMPGDNTEMNVELISTIAIE------EGTRFSIREGGRTVGSGVVSTITE |
| 3WY9 Chain:A ((5-426)) | ---------KPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPETIIKKFE---SFKFAW-VMDRLKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGVMPQTKEHAFLARTLGIKHIIVTINKMDMVNYDQKVFEKVKAQVEKLLKTLGY--KDFPVIPTSAWNGDNVVKKSDKMPWYNGPTLIEALDQ-IPEPEKPIDKPLRIPIQDVYSIKGVGTVPVGRVETGKLKVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEALPGDNIGFNVRGVSKNDIKRGDVAGHTDKPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQIPVRFEQILAKVDPRTGNI-VEENPQFIKTGDSAIVVLRPMKPVVLEPVKEIPQLGRFAIRDMGMTIAAGMVISIQK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136021 for 3016 contacts (-45.1/contact) +
2D Compatibility (PS) -40817 + (NN) -15851 + (LL) 324
1D Compatibility (HY) -27200 + (ID) 7750
Total energy: -227315.0 ( -75.37 by residue)
QMean score : 0.444
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