Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIRVTRLLEVKDLAISFKTYGGEVQAIRGVNFHLDKGETLAIVGESGSGKSVTSQAIMKLIPMPPGYFKRGEILFEGKDLVPLSEKEMQ---------NVRGKEIGMIFQDPMTSLNPTMKVGKQITEVLFKHEKISKEAAKKRAVELLELVGIPMPEKRVNQFPHEFSGGMRQRVVIAMALAANPKLLIADEPTTALDVTIQAQILELMKDLQKKIDTSIIFITHDLGVVANVADRVAVMYAGQIVETGTVDEIFYDPRHPYTWGLL-ASMPTLESSGEEELTAIPGTPPDLTNPPKGDAFALRSSYAMKIDFEQEPPMFKVSDTHYVKSWLLHPDAPKVEPPEAVKAKMRKLANTFEKPVLVREVE
1B0U Chain:A ((7-261))-------LHVIDL---HKRYGGH-EVLKGVSLQARAGDVISIIGSSGSGKSTFLRCI-NFLEKPS----EGAIIVNGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQH--FNLWSHMTVLENVMEAPIQVLGLSKHDARERALKYLAKVGID--ERAQGKYPVHLSGGQQQRVSIARALAMEPDVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVV-VTHEMGFARHVSSHVIFLHQGKIEEEGDPEQVFGNPQSPRLQQFLKGSLKKLE--------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1B0U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1245 -138418 -111.18 -564.97
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -111.18
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.463

(partial model without unconserved sides chains):
PDB file : Tito_1B0U.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1B0U-query.scw
PDB file : Tito_Scwrl_1B0U.pdb: