Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYYGIPVIVIATKADKIPKGKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEAWGAIKKMINR
1SVI Chain:A ((1-195))MKVTKSEIVISAVKPEQYPEGGLPEIALAGRSNVGKSSFINSLINR-------------QTLNFYIINDELHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMYEFLKYYGIPVIVIATKADKIPKGKWDKHAKVVRQTLNIDPEDELILFSSETKKGKDEAWGAIKKMINR


General information:
TITO was launched using:
RESULT:

Template: 1SVI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 897 -114373 -127.51 -628.42
target 2D structure prediction score : 0.74
Monomeric hydrophicity matching model chain A : 0.98

3D Compatibility (PKB) : -127.51
2D Compatibility (Sec. Struct. Predict.) : 0.74
1D Compatibility (Hydrophobicity) : 0.98
QMean score : 0.636

(partial model without unconserved sides chains):
PDB file : Tito_1SVI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1SVI-query.scw
PDB file : Tito_Scwrl_1SVI.pdb: