Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNAISLAVDQFVAVLTIHNPPANALSSRILEELSSCLDQCETDAGVRSIIIHGEGRFFSAGADIKEFTS----LKGNEDSSL------LAERGQQLMERIESFPKPIIAAIHGAALGGGLELAMACHIRIAAEDAKLGLPELNLGIIPGFAGTQRLPRYVGTAKAL-ELIGSGEPISGKEALDLGLVSIGAKDEAEVIEKAKALAAKFAEKSPQTL-ASLLELLYSNKVYSYEGSLKLEAKRFGEAFESEDAKEGIQAFLEKRKPQFKGE
1DCI Chain:C ((26-265))----------------------NAMNRAFWRELVECFQKISKDSDCRAVVVSGAGKMFTSGIDLMDMASDILQPPGDDVARIAWYLRDLISRYQKTFTVIEKCPKPVIAAIHGGCIGGGVDLISACDIRYCTQDAFFQVKEVDVGLAADVGTLQRLPKVIGNRSLVNELTFTARKMMADEALDSGLVSRVFPDKDVMLNAAFALAADISSKSPVAVQGSKINLIYSRD-HSVDESLDYMATWNMSMLQTQDIIKSVQAAMEKK-------


General information:
TITO was launched using:
RESULT:

Template: 1DCI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1037 -54791 -52.84 -240.31
target 2D structure prediction score : 0.54
Monomeric hydrophicity matching model chain C : 0.77

3D Compatibility (PKB) : -52.84
2D Compatibility (Sec. Struct. Predict.) : 0.54
1D Compatibility (Hydrophobicity) : 0.77
QMean score : 0.503

(partial model without unconserved sides chains):
PDB file : Tito_1DCI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DCI-query.scw
PDB file : Tito_Scwrl_1DCI.pdb: