Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPELPEVETVRRTLTGLVKGKTIKSVEIRWPN-IIKRPAEPEEFARKLAGETIQSIGRRGKFLLFHLDH-YVMVSHLRMEGKYGLHQAEEPDDKHVHVIFTMTDGTQLRYRDVRKFGTMHLFKPGEEAGELPLSQLGPEPDAEEFTSAYLKDRLAKTNRAVKTALLDQKTVVGLGNIYVDEALFRAGVHPETKANQLSDKTIKTLHAEIKNTLQEAIDAGGSTVRSYINSQGEIGMFQLQHFVYGKKDEPCK--NCGTMISKIVVGGRGTHFCAKCQTKK
3TWL Chain:A ((2-279))-PELPEVEAARRAIEENCLGKKIKRVIIADDNKVIHGI-SPSDFQTSILGKTIISARRKGKNLWLELDSPPFPSFQFGMAGAIYIK----WPSKYSKFFVELDDGLELSFTDKRRFAKVRLLANPT--SVSPISELGPDALLEPMTVDEFAESLAKKKITIKPLLLDQGYISGIGNWIADEVLYQARIHPLQTASSLSKEQCEALHTSIKEVIEKAVEVDADS-----------SQFPSNWIFHNREKKPGKAFVDGKKIDFITA------YVPELQKLY


General information:
TITO was launched using:
RESULT:

Template: 3TWL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1326 51259 38.66 204.22
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.74

3D Compatibility (PKB) : 38.66
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_3TWL.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3TWL-query.scw
PDB file : Tito_Scwrl_3TWL.pdb: