Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSEWWKEAVVYQIYPRSFYDANGDGFGDLQGVIQKLDYIKNLGADVIWLSPVFDSPQDDNGYDISDYKNMYEKFGTNEDMFQLIDEVHKRGMKIVMDLVVNHTSDEHAWFAESRKSKDNPYRDYYLWKDPKPDGSE-----PNNWGSIFSGSAWTYDEGTGQYYLHYFSKKQPDLNWENEAVRREVYD-VMRFWMDRGVDGWRMDVIGSISKYTDFPDYETDHSRSYIVGR--YHSNGPRLHEFIQEMNR----EVLSHYDCMTVGEANGSDIEEAKKYTDASRQELNMIFTFEHMDIDKEQNSPNGKWQIKPFDL----IALKKTMTRWQTGLMNVGWNTLYFENHDQPRVISRWGNDR-KLRKECAKAFATVLHGMKGTPFIYQGEEIGMVN-SDMPLEMYDDLEIKNAYRELVVENKTMSE--KEFVKAVMIKGRDHARTPMQWDAGK-HAGFT--AGDPWIPVNSRYQD-INVKESLEDQDSIFFYYQKLIQLRKQYK-IMIYG-DYQLLQENDPQVFSYLREYRGEKLLVVVNLSEEKALFEAPPELIHERWKVLISNYPQERADLKSISLKPYEAVMGISI
3AXI Chain:A ((13-588))--KWWKEATFYQIYPASFKDSNDDGWGDMKGIASKLEYIKELGADAIWISPFYDSPQDDMGYDIANYEKVWPTYGTNEDCFALIEKTHKLGMKFITDLVINHCSSEHEWFKESRSSKTNPKRDWFFWRPPKGYDAEGKPIPPNNWKSYFGGSAWTFDEKTQEFYLRLFCSTQPDLNWENEDCRKAIYESAVGYWLDHGVDGFRIDVGSLYSKVVGLPDAPVVDKNSTWQSSDPYTLNGPRIHEFHQEMNQFIRNRVKDGREIMTVGAMQHASDETKRLYTSASRHELSELFNFSHTDVG---TSPLFRYNLVPFELKDWKIALAE-LFRYING--TDCWSTIYLENHDQPRSITRFGDDSPKNRVISGKLLSVLLSALTGTLYVYQGQELGQINFKNWPVEKYEDVEIRNNYNAIKEEHGENSEEMKKFLEAIALISRDHARTPMQWSREEPNAGFSGPSAKPWFYLNDSFREGINVEDEIKDPNSVLNFWKEALKFRKAHKDITVYGYDFEFIDLDNKKLFSFTKKYNNKTLFAALNFSSDATDFKIPND--DSSFKLEFGNYPKKEVDASSRTLKPWEGRIYIS-


General information:
TITO was launched using:
RESULT:

Template: 3AXI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 3186 141847 44.52 257.90
target 2D structure prediction score : 0.71
Monomeric hydrophicity matching model chain A : 0.82

3D Compatibility (PKB) : 44.52
2D Compatibility (Sec. Struct. Predict.) : 0.71
1D Compatibility (Hydrophobicity) : 0.82
QMean score : 0.468

(partial model without unconserved sides chains):
PDB file : Tito_3AXI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3AXI-query.scw
PDB file : Tito_Scwrl_3AXI.pdb: